PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012574126.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family NAC
Protein Properties Length: 404aa    MW: 46045 Da    PI: 4.5292
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012574126.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM147.28.6e-46121411128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     +p+GfrF+Ptdeelv++yLk+k+ g++  l++vi+evd++k+ePwdLp+  ++k+++ ew+f + rd kya++kr nr tk g+Wkatg+d++++
  XP_012574126.1  12 VPVGFRFRPTDEELVNHYLKNKLLGNDSILHNVIAEVDVCKFEPWDLPAcsAIKSDDPEWFFLCARDYKYAKSKRLNRRTKCGFWKATGNDRNIK 106
                     599************************999899***************5347888888************************************* PP

             NAM  94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++ +++++g+kktLvfykg  p  +kt+Wv+hey++
  XP_012574126.1 107 VRgTNKVIGTKKTLVFYKGCVPG-VKTNWVIHEYHA 141
                     9967778**********988775.9*********96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-4911159IPR003441NAC domain
PROSITE profilePS5100550.61812159IPR003441NAC domain
PfamPF023657.1E-2613140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
METTSFPILD FVPVGFRFRP TDEELVNHYL KNKLLGNDSI LHNVIAEVDV CKFEPWDLPA  60
CSAIKSDDPE WFFLCARDYK YAKSKRLNRR TKCGFWKATG NDRNIKVRGT NKVIGTKKTL  120
VFYKGCVPGV KTNWVIHEYH AVTFEDSQRN FVLCRLMKKA EKNGEDETDT MICDEGEPSR  180
PLSSDYENQE TVEGISDVDG TLQEMNMESL FQAPHQADRY FPFSTQQSSI FENEQEVSFQ  240
NYRFPDAYFG NENIVVQSPF ETIEEENKFI KSMFIDGEFV TSERRRHAFV NGPTESESLR  300
RVYYQSIDSN VEVVSTPFGD IPDTSTAYLE YRGSIEYNAS NVFQSMHGVL HGSTCLVSSN  360
NSNSQSTFQD DFLGVEASSC DSTADKPSEF NCNENEISSS PSTL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-351215917165NO APICAL MERISTEM PROTEIN
1ut4_B3e-351215917165NO APICAL MERISTEM PROTEIN
1ut7_A3e-351215917165NO APICAL MERISTEM PROTEIN
1ut7_B3e-351215917165NO APICAL MERISTEM PROTEIN
3swm_A3e-351215920168NAC domain-containing protein 19
3swm_B3e-351215920168NAC domain-containing protein 19
3swm_C3e-351215920168NAC domain-containing protein 19
3swm_D3e-351215920168NAC domain-containing protein 19
3swp_A3e-351215920168NAC domain-containing protein 19
3swp_B3e-351215920168NAC domain-containing protein 19
3swp_C3e-351215920168NAC domain-containing protein 19
3swp_D3e-351215920168NAC domain-containing protein 19
4dul_A3e-351215917165NAC domain-containing protein 19
4dul_B3e-351215917165NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012574126.10.0PREDICTED: NAC domain-containing protein 69-like isoform X1
TrEMBLG7ZZ261e-176G7ZZ26_MEDTR; NAC domain protein
STRINGGLYMA16G01930.11e-132(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20652586
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.31e-54NAC transcription factor-like 9